Bio* Library for Clojure.
Biotools is my basic bioinformatics file parsing library. You can find it at GitHub. It can parse BLAST+ Tab output (-outfmt “6 std qlen slen”), ExPASY ENZYME.dat, FASTA, GFF3, FPKM Tracking files from Cufflinks, Interproscan tab delimited output, Gene Ontology/Plant Ontology OBO format (any Ontology in OBO format), PMN Pathways format, and a PSI-MITAB 2.5 format. These are all… Read More »